Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB406_0257 | AB406_0258 | AB406_0257 | AB406_0258 | Hypothetical protein. | DEAD/DEAH box helicase family protein. | 0.529 |
AB406_0257 | AB406_0259 | AB406_0257 | AB406_0259 | Hypothetical protein. | Hypothetical protein. | 0.528 |
AB406_0257 | AB406_1212 | AB406_0257 | AB406_1212 | Hypothetical protein. | Hypothetical protein. | 0.538 |
AB406_0257 | AB406_1803 | AB406_0257 | AB406_1803 | Hypothetical protein. | Hypothetical protein. | 0.541 |
AB406_0257 | AB406_1942 | AB406_0257 | AB406_1942 | Hypothetical protein. | Hypothetical protein. | 0.510 |
AB406_0257 | AB406_1943 | AB406_0257 | AB406_1943 | Hypothetical protein. | Hypothetical protein. | 0.472 |
AB406_0257 | AB406_2197 | AB406_0257 | AB406_2197 | Hypothetical protein. | Hypothetical protein. | 0.559 |
AB406_0257 | AB406_2311 | AB406_0257 | AB406_2311 | Hypothetical protein. | Putative membrane protein insertion efficiency factor. | 0.537 |
AB406_0257 | coaD | AB406_0257 | AB406_1484 | Hypothetical protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.568 |
AB406_0257 | yiaD | AB406_0257 | AB406_0256 | Hypothetical protein. | Putative lipoprotein YiaD precursor. | 0.581 |
AB406_0258 | AB406_0257 | AB406_0258 | AB406_0257 | DEAD/DEAH box helicase family protein. | Hypothetical protein. | 0.529 |
AB406_0258 | AB406_0259 | AB406_0258 | AB406_0259 | DEAD/DEAH box helicase family protein. | Hypothetical protein. | 0.782 |
AB406_0258 | yiaD | AB406_0258 | AB406_0256 | DEAD/DEAH box helicase family protein. | Putative lipoprotein YiaD precursor. | 0.478 |
AB406_0259 | AB406_0257 | AB406_0259 | AB406_0257 | Hypothetical protein. | Hypothetical protein. | 0.528 |
AB406_0259 | AB406_0258 | AB406_0259 | AB406_0258 | Hypothetical protein. | DEAD/DEAH box helicase family protein. | 0.782 |
AB406_0259 | yiaD | AB406_0259 | AB406_0256 | Hypothetical protein. | Putative lipoprotein YiaD precursor. | 0.410 |
AB406_1212 | AB406_0257 | AB406_1212 | AB406_0257 | Hypothetical protein. | Hypothetical protein. | 0.538 |
AB406_1212 | AB406_1803 | AB406_1212 | AB406_1803 | Hypothetical protein. | Hypothetical protein. | 0.682 |
AB406_1212 | AB406_1943 | AB406_1212 | AB406_1943 | Hypothetical protein. | Hypothetical protein. | 0.725 |
AB406_1803 | AB406_0257 | AB406_1803 | AB406_0257 | Hypothetical protein. | Hypothetical protein. | 0.541 |
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