Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fepAFerrienterobactin receptor precursor. (976 aa)    
Predicted Functional Partners:
AB406_0731
Ragb/susd domain-containing protein.
 
     0.942
AB406_1465
Hypothetical protein.
 
 
   0.849
AB406_1184
Hypothetical protein.
 
 
   0.777
AB406_0184
Glycan metabolism protein RagB.
 
 
   0.768
AB406_0896
Hypothetical protein.
  
     0.683
AB406_0152
Hypothetical protein.
  
 
  0.575
AB406_1463
Hypothetical protein.
  
     0.553
AB406_0127
Hypothetical protein.
  
     0.508
tri1
Tricorn protease like protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
 
     0.498
AB406_2225
Ragb/susd domain-containing protein.
 
  
 0.487
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.