Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yhbUPutative protease YhbU precursor. (414 aa)    
Predicted Functional Partners:
AB406_0845
4fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
     0.913
fixN
Cytochrome c oxidase subunit 1 like protein, bacteroid; Belongs to the heme-copper respiratory oxidase family.
   
   0.872
AB406_1240
Putative O-methyltransferase.
  
  
 0.689
AB406_1068
Hypothetical protein.
      0.671
AB406_0846
Putative 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.566
nuoC1
NADH-quinone oxidoreductase subunit C 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.
  
   0.534
mucD
Putative periplasmic serine endoprotease DegP-like precursor.
     
 0.507
AB406_0608
Hypothetical protein.
   
   0.476
nqo3
NADH-quinone oxidoreductase chain 3.
   
   0.475
nqo1
NADH-quinone oxidoreductase subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
   0.469
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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