STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zraSSensor protein ZraS. (449 aa)    
Predicted Functional Partners:
yycF
Transcriptional regulatory protein YycF.
 
 
 
 0.862
yfiC
tRNA1(Val) (adenine(37)-N6)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
       0.790
zraR
Transcriptional regulatory protein ZraR.
 
 
 0.728
mprA
Response regulator MprA.
 
 
 
 0.725
ribE
Riboflavin synthase.
       0.607
ompR
Transcriptional regulatory protein OmpR.
 
 
 0.431
phoR
Alkaline phosphatase synthesis sensor protein PhoR.
 
   
0.416
todS
Sensor histidine kinase TodS.
 
 
 
0.408
AB406_0885
Hypothetical protein.
 
     0.405
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.