Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AB406_0945Hypothetical protein. (196 aa)    
Predicted Functional Partners:
sufC
Putative ATP-dependent transporter SufC.
  
  
 0.745
sufE
Cysteine desulfuration protein SufE.
  
 0.729
sufB
FeS cluster assembly protein SufB.
  
 
 0.662
sufD
FeS cluster assembly protein SufD.
  
 
 0.662
moeZ
Putative adenylyltransferase/sulfurtransferase MoeZ.
  
 
 0.633
gcvP
Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family.
  
 
  0.612
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.594
AB406_0947
Thioesterase.
       0.555
AB406_0948
Outer membrane chaperone skp (omph).
       0.432
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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