Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
AB406_1010Hypothetical protein. (197 aa)    
Predicted Functional Partners:
pabB
Aminodeoxychorismate synthase component 1.
 
 
 0.977
pdhB-2
Pyruvate dehydrogenase E1 component subunit beta.
  
 0.949
folP
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
 
 0.887
thrA
Bifunctional aspartokinase/homoserine dehydrogenase 1.
  
 
 0.826
yngG
Hydroxymethylglutaryl-CoA lyase YngG.
  
 0.731
aroF
Phospho-2-dehydro-3-deoxyheptonate aldolase.
    
 0.727
pabA
Aminodeoxychorismate synthase component 2.
 
 
 0.721
trpE
Anthranilate synthase component 1.
  
 
 0.600
AB406_1008
Hypothetical protein.
       0.562
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.502
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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