STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AB406_1089Quinol:cytochrome c oxidoreductase membrane protein. (173 aa)    
Predicted Functional Partners:
AB406_1088
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 
 0.999
ttrB
Tetrathionate reductase subunit B precursor.
 
 
 0.998
AB406_1091
Hypothetical protein.
 
 
 0.998
fixN
Cytochrome c oxidase subunit 1 like protein, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.998
AB406_1090
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
 
   0.992
cycA
Cytochrome c2 precursor.
 
 
 0.967
AB406_1037
Hypothetical protein.
  
     0.582
AB406_1393
Hypothetical protein.
  
 
 0.576
AB406_1390
Hypothetical protein.
 
 
 0.547
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.543
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.