rpoE protein (Riemerella anatipestifer) - STRING interaction network

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Score

rpoE

ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily. (196 aa)

Predicted Functional Partners:

rpoE-2

0.753

sigG

0.734

AB406_1144

0.636

yjjG

0.604

comM

0.519

rpoC

0.467

sigV

0.465

rpoB

0.446

trpS

0.424

rpoA

0.401

Your Current Organism:

Riemerella anatipestifer

NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AB406_1144	rpoE	AB406_1144	AB406_1143	Hypothetical protein.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.636
AB406_1144	trpS	AB406_1144	AB406_1146	Hypothetical protein.	Tryptophan--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.503
AB406_1144	yjjG	AB406_1144	AB406_1145	Hypothetical protein.	Pyrimidine 5'-nucleotidase YjjG.	0.732
comM	rpoE	AB406_1142	AB406_1143	Competence protein ComM.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.519
rpoA	rpoB	AB406_0780	AB406_1420	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
rpoA	rpoC	AB406_0780	AB406_1421	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
rpoA	rpoE	AB406_0780	AB406_1143	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.401
rpoA	rpoE-2	AB406_0780	AB406_2282	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.401
rpoA	sigG	AB406_0780	AB406_1572	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily.	0.401
rpoA	sigV	AB406_0780	AB406_2127	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.401
rpoB	rpoA	AB406_1420	AB406_0780	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.991
rpoB	rpoC	AB406_1420	AB406_1421	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoE	AB406_1420	AB406_1143	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.446
rpoB	rpoE-2	AB406_1420	AB406_2282	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.446
rpoB	sigG	AB406_1420	AB406_1572	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigG; Belongs to the sigma-70 factor family. ECF subfamily.	0.446
rpoB	sigV	AB406_1420	AB406_2127	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.	0.446
rpoC	rpoA	AB406_1421	AB406_0780	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
rpoC	rpoB	AB406_1421	AB406_1420	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoE	AB406_1421	AB406_1143	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.467
rpoC	rpoE-2	AB406_1421	AB406_2282	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.467

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