STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumAFumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (535 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); Belongs to the GcvP family.
   
    0.999
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.997
frdA
Fumarate reductase flavoprotein subunit.
  
 
 0.997
frdB
Fumarate reductase iron-sulfur subunit.
  
 
 0.988
maeB
NADP-dependent malic enzyme.
 
 
 0.973
gltA2
Citrate synthase 1; Belongs to the citrate synthase family.
  
 
 0.971
AB406_0681
Putative succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
    
 0.912
sad
Succinate semialdehyde dehydrogenase [NAD(P)+] Sad.
  
 
 0.858
aspC
Aspartate aminotransferase.
    
 0.807
aspC-2
Aspartate aminotransferase.
    
 0.807
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.