Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB406_1224 | AB406_1428 | AB406_1224 | AB406_1428 | RNA polymerase rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Hypothetical protein. | 0.441 |
AB406_1224 | gmk | AB406_1224 | AB406_1429 | RNA polymerase rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.836 |
AB406_1224 | pyrE | AB406_1224 | AB406_2070 | RNA polymerase rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.610 |
AB406_1428 | AB406_1224 | AB406_1428 | AB406_1224 | Hypothetical protein. | RNA polymerase rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.441 |
AB406_1428 | AB406_1430 | AB406_1428 | AB406_1430 | Hypothetical protein. | Quinolinate synthase. | 0.701 |
AB406_1428 | folB | AB406_1428 | AB406_1431 | Hypothetical protein. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.737 |
AB406_1428 | gmk | AB406_1428 | AB406_1429 | Hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.893 |
AB406_1430 | AB406_1428 | AB406_1430 | AB406_1428 | Quinolinate synthase. | Hypothetical protein. | 0.701 |
AB406_1430 | folB | AB406_1430 | AB406_1431 | Quinolinate synthase. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.816 |
AB406_1430 | gmk | AB406_1430 | AB406_1429 | Quinolinate synthase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.903 |
AB406_1430 | pyrE | AB406_1430 | AB406_2070 | Quinolinate synthase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.481 |
adk | gmk | AB406_2178 | AB406_1429 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.740 |
adk | guaA | AB406_2178 | AB406_2099 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.618 |
adk | pyrE | AB406_2178 | AB406_2070 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.511 |
folB | AB406_1428 | AB406_1431 | AB406_1428 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Hypothetical protein. | 0.737 |
folB | AB406_1430 | AB406_1431 | AB406_1430 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Quinolinate synthase. | 0.816 |
folB | gmk | AB406_1431 | AB406_1429 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.776 |
gmk | AB406_1224 | AB406_1429 | AB406_1224 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | RNA polymerase rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.836 |
gmk | AB406_1428 | AB406_1429 | AB406_1428 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Hypothetical protein. | 0.893 |
gmk | AB406_1430 | AB406_1429 | AB406_1430 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Quinolinate synthase. | 0.903 |
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