STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AB406_1459Hypothetical protein. (187 aa)    
Predicted Functional Partners:
AB406_2162
Gliding motility protein gldj.
  
   
 0.894
AB406_2156
Gliding motility ABC transporter auxiliary protein.
  
   
 0.891
AB406_1551
Gliding motility protein gldl.
  
   
 0.888
AB406_1553
Hypothetical protein.
  
   
 0.884
pkn1
Serine/threonine-protein kinase pkn1.
  
   
 0.875
AB406_1552
Gliding motility protein gldm.
  
   
 0.859
AB406_1531
Hypothetical protein.
  
   
 0.848
AB406_0810
Hypothetical protein.
  
   
 0.843
gldH
Gliding motility lipoprotein GldH precursor.
  
   
 0.797
AB406_0733
Hypothetical protein.
  
   
 0.788
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.