Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AB406_1902Outer membrane efflux protein. (413 aa)    
Predicted Functional Partners:
czcA
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.990
cnrB-2
Nickel and cobalt resistance protein CnrB.
 
  0.965
cnrB
Nickel and cobalt resistance protein CnrB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.853
mdtC
Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.844
AB406_1903
Transposase is4 family protein.
       0.773
AB406_2371
HlyD family secretion protein.
 
 0.767
AB406_1900
Hypothetical protein.
 
     0.763
mpl
UDP-N-acetylmuramate:L-alanyl-gamma-D- glutamyl-meso-diaminopimelate ligase.
 
     0.629
bepE
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.516
AB406_0894
Tonb-dependent receptor.
  
    0.461
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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