STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein subunit beta. (248 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein subunit alpha.
 0.999
acdA
Acyl-CoA dehydrogenase.
 
 
 0.904
acdA-2
Acyl-CoA dehydrogenase.
 
 
 0.890
fadE
Putative acyl-CoA dehydrogenase.
 
 
 0.884
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.860
acd
Glutaryl-CoA dehydrogenase.
 
 
 0.805
sucD
Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
  
 0.671
cycA
Cytochrome c2 precursor.
   
 
 0.670
AB406_0871
Transmembrane (4fe-4S) cluster-binding oxidoreductase.
 
  
 0.665
dprE1
Putative decaprenylphosphoryl-beta-D-ribose oxidase.
  
 
 0.632
Your Current Organism:
Riemerella anatipestifer
NCBI taxonomy Id: 34085
Other names: ATCC 11845, CCUG 14215, CCUG 21370, CIP 82.28, DSM 15868, JCM 9532, LMG 11054, LMG 11606, LMG:11054, LMG:11606, MCCM 00568, Moraxella anatipestifer, NCTC 11014, Pasteurella anapestifer, Pasteurella anatipestifer, Pfeifferella anatipestifer, R. anatipestifer
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