Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL54844.1 | SDL54881.1 | SAMN04488084_101636 | SAMN04488084_101637 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Transcriptional regulator, AraC family. | 0.625 |
SDL54881.1 | SDL54844.1 | SAMN04488084_101637 | SAMN04488084_101636 | Transcriptional regulator, AraC family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.625 |
SDL54881.1 | SDL54914.1 | SAMN04488084_101637 | SAMN04488084_101638 | Transcriptional regulator, AraC family. | PepSY-associated TM region. | 0.481 |
SDL54881.1 | SDL54955.1 | SAMN04488084_101637 | SAMN04488084_101639 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.481 |
SDL54881.1 | SDL54992.1 | SAMN04488084_101637 | SAMN04488084_101640 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.481 |
SDL54881.1 | rpoA | SAMN04488084_101637 | SAMN04488084_103361 | Transcriptional regulator, AraC family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.448 |
SDL54914.1 | SDL54881.1 | SAMN04488084_101638 | SAMN04488084_101637 | PepSY-associated TM region. | Transcriptional regulator, AraC family. | 0.481 |
SDL54914.1 | SDL54955.1 | SAMN04488084_101638 | SAMN04488084_101639 | PepSY-associated TM region. | Hypothetical protein. | 0.958 |
SDL54914.1 | SDL54992.1 | SAMN04488084_101638 | SAMN04488084_101640 | PepSY-associated TM region. | Hypothetical protein. | 0.824 |
SDL54955.1 | SDL54881.1 | SAMN04488084_101639 | SAMN04488084_101637 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.481 |
SDL54955.1 | SDL54914.1 | SAMN04488084_101639 | SAMN04488084_101638 | Hypothetical protein. | PepSY-associated TM region. | 0.958 |
SDL54955.1 | SDL54992.1 | SAMN04488084_101639 | SAMN04488084_101640 | Hypothetical protein. | Hypothetical protein. | 0.824 |
SDL54992.1 | SDL54881.1 | SAMN04488084_101640 | SAMN04488084_101637 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.481 |
SDL54992.1 | SDL54914.1 | SAMN04488084_101640 | SAMN04488084_101638 | Hypothetical protein. | PepSY-associated TM region. | 0.824 |
SDL54992.1 | SDL54955.1 | SAMN04488084_101640 | SAMN04488084_101639 | Hypothetical protein. | Hypothetical protein. | 0.824 |
rpoA | SDL54881.1 | SAMN04488084_103361 | SAMN04488084_101637 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcriptional regulator, AraC family. | 0.448 |