Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL48211.1 | SDL69724.1 | SAMN04488084_101436 | SAMN04488084_102145 | Homoserine dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.578 |
SDL48211.1 | SDM14591.1 | SAMN04488084_101436 | SAMN04488084_10461 | Homoserine dehydrogenase. | Aspartate kinase. | 0.938 |
SDL48211.1 | asd | SAMN04488084_101436 | SAMN04488084_10887 | Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.976 |
SDL69022.1 | SDL69724.1 | SAMN04488084_102117 | SAMN04488084_102145 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.674 |
SDL69022.1 | SDM14591.1 | SAMN04488084_102117 | SAMN04488084_10461 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Aspartate kinase. | 0.727 |
SDL69724.1 | SDL48211.1 | SAMN04488084_102145 | SAMN04488084_101436 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Homoserine dehydrogenase. | 0.578 |
SDL69724.1 | SDL69022.1 | SAMN04488084_102145 | SAMN04488084_102117 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.674 |
SDL69724.1 | SDL69741.1 | SAMN04488084_102145 | SAMN04488084_102146 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | NADP-dependent aldehyde dehydrogenase. | 0.926 |
SDL69724.1 | SDL69763.1 | SAMN04488084_102145 | SAMN04488084_102147 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Proline racemase; Belongs to the proline racemase family. | 0.956 |
SDL69724.1 | SDL69782.1 | SAMN04488084_102145 | SAMN04488084_102148 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | D-amino-acid dehydrogenase. | 0.949 |
SDL69724.1 | SDM14591.1 | SAMN04488084_102145 | SAMN04488084_10461 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Aspartate kinase. | 0.750 |
SDL69724.1 | SDM37116.1 | SAMN04488084_102145 | SAMN04488084_10659 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Dihydrodipicolinate reductase; Belongs to the DapB family. | 0.743 |
SDL69724.1 | asd | SAMN04488084_102145 | SAMN04488084_10887 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.822 |
SDL69724.1 | dapB | SAMN04488084_102145 | SAMN04488084_11050 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.860 |
SDL69724.1 | gatC | SAMN04488084_102145 | SAMN04488084_10119 | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.650 |
SDL69741.1 | SDL69724.1 | SAMN04488084_102146 | SAMN04488084_102145 | NADP-dependent aldehyde dehydrogenase. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.926 |
SDL69741.1 | SDL69763.1 | SAMN04488084_102146 | SAMN04488084_102147 | NADP-dependent aldehyde dehydrogenase. | Proline racemase; Belongs to the proline racemase family. | 0.960 |
SDL69741.1 | SDL69782.1 | SAMN04488084_102146 | SAMN04488084_102148 | NADP-dependent aldehyde dehydrogenase. | D-amino-acid dehydrogenase. | 0.919 |
SDL69741.1 | SDM14591.1 | SAMN04488084_102146 | SAMN04488084_10461 | NADP-dependent aldehyde dehydrogenase. | Aspartate kinase. | 0.549 |
SDL69763.1 | SDL69724.1 | SAMN04488084_102147 | SAMN04488084_102145 | Proline racemase; Belongs to the proline racemase family. | 4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. | 0.956 |
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