STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM68908.1Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family. (818 aa)    
Predicted Functional Partners:
SDM04305.1
Beta-glucosidase.
 
 0.931
SDM02538.1
Maltose phosphorylase.
 
  
  0.903
SDM56088.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.899
SDM50990.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.898
SDM38761.1
Alpha-amylase.
    
 0.886
SDM86724.1
Fructokinase.
   
 
 0.878
SDM05052.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 0.833
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
 0.823
SDM04327.1
Aconitase.
    
   0.727
SDL45802.1
4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,TIGR02401.
    
 0.692
Your Current Organism:
Pedobacter antarcticus
NCBI taxonomy Id: 34086
Other names: ATCC 51969, CIP 104195 [[Pedobacter piscium]], DSM 11725 [[Pedobacter piscium]], IFO 14985 [[Pedobacter piscium]], JCM 7454 [[Pedobacter piscium]], KCTC 12489 [[Pedobacter piscium]], LMG 14024 [[Pedobacter piscium]], LMG:14024 [[Pedobacter piscium]], MTCC 675, NBRC 14985 [[Pedobacter piscium]], NCIMB 13704 [[Pedobacter piscium]], P. antarcticus, Pedobacter piscium, Sphingobacterium antarcticum, Sphingobacterium antarcticus, Sphingobacterium piscium, strain 4BY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.