Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL51237.1 | SDM08221.1 | SAMN04488084_101535 | SAMN04488084_103525 | Glutamate synthase (NADPH/NADH) large chain. | Amidophosphoribosyltransferase. | 0.956 |
SDL51237.1 | SDM29815.1 | SAMN04488084_101535 | SAMN04488084_105165 | Glutamate synthase (NADPH/NADH) large chain. | Orotidine-5'-phosphate decarboxylase. | 0.406 |
SDL51237.1 | SDM50175.1 | SAMN04488084_101535 | SAMN04488084_107159 | Glutamate synthase (NADPH/NADH) large chain. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.915 |
SDL51237.1 | SDM71334.1 | SAMN04488084_101535 | SAMN04488084_11214 | Glutamate synthase (NADPH/NADH) large chain. | Carbamoyl-phosphate synthase large subunit. | 0.974 |
SDL51237.1 | carA | SAMN04488084_101535 | SAMN04488084_103405 | Glutamate synthase (NADPH/NADH) large chain. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.944 |
SDM08221.1 | SDL51237.1 | SAMN04488084_103525 | SAMN04488084_101535 | Amidophosphoribosyltransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.956 |
SDM08221.1 | SDM29815.1 | SAMN04488084_103525 | SAMN04488084_105165 | Amidophosphoribosyltransferase. | Orotidine-5'-phosphate decarboxylase. | 0.535 |
SDM08221.1 | SDM50175.1 | SAMN04488084_103525 | SAMN04488084_107159 | Amidophosphoribosyltransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.543 |
SDM08221.1 | SDM71334.1 | SAMN04488084_103525 | SAMN04488084_11214 | Amidophosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit. | 0.974 |
SDM08221.1 | carA | SAMN04488084_103525 | SAMN04488084_103405 | Amidophosphoribosyltransferase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.962 |
SDM08221.1 | pyrB | SAMN04488084_103525 | SAMN04488084_10613 | Amidophosphoribosyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.714 |
SDM08221.1 | pyrD | SAMN04488084_103525 | SAMN04488084_106113 | Amidophosphoribosyltransferase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.494 |
SDM08221.1 | pyrE | SAMN04488084_103525 | SAMN04488084_10279 | Amidophosphoribosyltransferase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.555 |
SDM29815.1 | SDL51237.1 | SAMN04488084_105165 | SAMN04488084_101535 | Orotidine-5'-phosphate decarboxylase. | Glutamate synthase (NADPH/NADH) large chain. | 0.406 |
SDM29815.1 | SDM08221.1 | SAMN04488084_105165 | SAMN04488084_103525 | Orotidine-5'-phosphate decarboxylase. | Amidophosphoribosyltransferase. | 0.535 |
SDM29815.1 | SDM66897.1 | SAMN04488084_105165 | SAMN04488084_11113 | Orotidine-5'-phosphate decarboxylase. | Dihydroorotase. | 0.771 |
SDM29815.1 | SDM68024.1 | SAMN04488084_105165 | SAMN04488084_11152 | Orotidine-5'-phosphate decarboxylase. | Dihydroorotase. | 0.808 |
SDM29815.1 | SDM71334.1 | SAMN04488084_105165 | SAMN04488084_11214 | Orotidine-5'-phosphate decarboxylase. | Carbamoyl-phosphate synthase large subunit. | 0.951 |
SDM29815.1 | carA | SAMN04488084_105165 | SAMN04488084_103405 | Orotidine-5'-phosphate decarboxylase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.952 |
SDM29815.1 | pyrB | SAMN04488084_105165 | SAMN04488084_10613 | Orotidine-5'-phosphate decarboxylase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.944 |
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