STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB68025.1ATP-binding cassette, subfamily B, MsbA. (575 aa)    
Predicted Functional Partners:
SFB67206.1
Ankyrin repeat.
   
 0.951
SFB67656.1
Ankyrin repeat.
   
 0.951
SFB97351.1
Ankyrin repeat.
   
 0.951
SFB70262.1
ABC-2 type transport system ATP-binding protein.
 
0.855
SFB67699.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
   
 0.772
SFB71098.1
Tetratricopeptide repeat-containing protein.
 
 0.771
SFB68033.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
    0.757
SFB68043.1
Hypothetical protein.
       0.736
SFB94057.1
4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis.
  
  0.575
SFB90946.1
Long-chain acyl-CoA synthetase.
 
 
 0.563
Your Current Organism:
Brevinema andersonii
NCBI taxonomy Id: 34097
Other names: ATCC 43811, B. andersonii, strain CT11616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.