STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB68685.1Aspartate aminotransferase. (391 aa)    
Predicted Functional Partners:
SFB81968.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.925
SFB67699.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
  
 
 0.870
SFB85970.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.867
SFB70555.1
NAD+ synthase (glutamine-hydrolysing); Belongs to the NAD synthetase family.
  
 
 0.828
SFB71098.1
Tetratricopeptide repeat-containing protein.
  
 
 0.794
SFB85203.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
 
 0.771
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 0.768
SFB69703.1
Aspartate aminotransferase.
  
 0.762
SFB71787.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 0.762
SFB95254.1
Fumarate reductase flavoprotein subunit.
   
 
 0.760
Your Current Organism:
Brevinema andersonii
NCBI taxonomy Id: 34097
Other names: ATCC 43811, B. andersonii, strain CT11616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.