Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFB67018.1 | SFB67728.1 | SAMN02745150_00010 | SAMN02745150_00098 | RNase H. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.711 |
| SFB67018.1 | SFB67970.1 | SAMN02745150_00010 | SAMN02745150_00129 | RNase H. | DNA polymerase-3 subunit alpha. | 0.698 |
| SFB67018.1 | SFB70973.1 | SAMN02745150_00010 | SAMN02745150_00392 | RNase H. | DNA polymerase III, delta subunit. | 0.666 |
| SFB67018.1 | SFB73923.1 | SAMN02745150_00010 | SAMN02745150_00508 | RNase H. | single-stranded-DNA-specific exonuclease. | 0.471 |
| SFB67018.1 | SFB73941.1 | SAMN02745150_00010 | SAMN02745150_00509 | RNase H. | DNA polymerase III, delta subunit. | 0.665 |
| SFB67018.1 | SFB78522.1 | SAMN02745150_00010 | SAMN02745150_00791 | RNase H. | Single-strand DNA-binding protein. | 0.900 |
| SFB67662.1 | SFB67728.1 | SAMN02745150_00090 | SAMN02745150_00098 | ATP-dependent DNA helicase DinG. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.973 |
| SFB67662.1 | SFB67970.1 | SAMN02745150_00090 | SAMN02745150_00129 | ATP-dependent DNA helicase DinG. | DNA polymerase-3 subunit alpha. | 0.707 |
| SFB67662.1 | SFB70973.1 | SAMN02745150_00090 | SAMN02745150_00392 | ATP-dependent DNA helicase DinG. | DNA polymerase III, delta subunit. | 0.670 |
| SFB67662.1 | SFB73941.1 | SAMN02745150_00090 | SAMN02745150_00509 | ATP-dependent DNA helicase DinG. | DNA polymerase III, delta subunit. | 0.575 |
| SFB67728.1 | SFB67018.1 | SAMN02745150_00098 | SAMN02745150_00010 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | RNase H. | 0.711 |
| SFB67728.1 | SFB67662.1 | SAMN02745150_00098 | SAMN02745150_00090 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | ATP-dependent DNA helicase DinG. | 0.973 |
| SFB67728.1 | SFB67970.1 | SAMN02745150_00098 | SAMN02745150_00129 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase-3 subunit alpha. | 0.967 |
| SFB67728.1 | SFB70973.1 | SAMN02745150_00098 | SAMN02745150_00392 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase III, delta subunit. | 0.967 |
| SFB67728.1 | SFB73941.1 | SAMN02745150_00098 | SAMN02745150_00509 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase III, delta subunit. | 0.965 |
| SFB67728.1 | SFB78522.1 | SAMN02745150_00098 | SAMN02745150_00791 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Single-strand DNA-binding protein. | 0.547 |
| SFB67728.1 | ligA | SAMN02745150_00098 | SAMN02745150_00547 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.703 |
| SFB67728.1 | uvrC | SAMN02745150_00098 | SAMN02745150_00055 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.711 |
| SFB67970.1 | SFB67018.1 | SAMN02745150_00129 | SAMN02745150_00010 | DNA polymerase-3 subunit alpha. | RNase H. | 0.698 |
| SFB67970.1 | SFB67662.1 | SAMN02745150_00129 | SAMN02745150_00090 | DNA polymerase-3 subunit alpha. | ATP-dependent DNA helicase DinG. | 0.707 |
page 1 of 4