STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ03317.1Multimeric flavodoxin WrbA. (186 aa)    
Predicted Functional Partners:
ubiE
Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
ArgC
N-acetyl-gamma-glutamyl-phosphate reductase.
 
    0.718
SIQ03351.1
Hypothetical protein; Belongs to the pirin family.
       0.632
SIQ03284.1
Uncharacterized membrane protein.
       0.613
LysM
Nucleoid-associated protein YgaU, contains BON and LysM domains.
   
  
 0.511
SIQ26629.1
LysM domain-containing protein.
   
  
 0.488
SIQ23457.1
BON domain-containing protein.
   
  
 0.484
SIQ17936.1
Putative serine protein kinase, PrkA.
   
    0.474
SIQ02556.1
Signal transduction histidine kinase.
  
     0.465
SIQ06160.1
Nicotinamidase-related amidase.
  
    0.458
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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