STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ07961.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
SIQ07996.1
Hypothetical protein.
       0.645
SIQ08049.1
Hypothetical protein.
       0.645
SIQ08092.1
Hypothetical protein.
       0.540
SIQ08132.1
Hypothetical protein.
       0.540
SIQ08180.1
Hypothetical protein.
       0.540
SIQ08225.1
Hypothetical protein.
       0.540
SIQ08281.1
Hypothetical protein.
       0.540
SIQ08334.1
Hypothetical protein.
       0.527
SIQ08378.1
Hypothetical protein.
       0.523
SIQ07862.1
Phage terminase small subunit.
       0.519
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.