STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP99379.1Phosphonate transport system substrate-binding protein. (256 aa)    
Predicted Functional Partners:
SIP99340.1
Aerotaxis receptor.
 
     0.936
SIP99269.1
Hypothetical protein.
 
     0.932
SIP99228.1
Hypothetical protein.
 
     0.880
SIP99186.1
Hypothetical protein.
 
     0.857
SIP99145.1
Hypothetical protein.
 
     0.842
SIP99426.1
FimV N-terminal domain-containing protein.
 
     0.803
SIR52221.1
Hypothetical protein.
 
     0.752
SIS01855.1
PAS domain S-box-containing protein.
 
  
 0.587
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 0.530
PilV-2
Type IV pilus assembly protein PilV.
  
     0.522
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.