STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ90685.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (419 aa)    
Predicted Functional Partners:
SIQ90731.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.996
SIQ90771.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.996
SIQ54023.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
 0.888
SIQ54117.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
 0.882
SIQ90820.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 
 0.820
SIQ90648.1
Cro/C1-type HTH DNA-binding domain-containing protein.
 
     0.615
SIQ31432.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 
 0.542
SIQ32248.1
Sorbitol ABC transporter membrane protein.
  
 
 0.538
SIQ92236.1
Trehalose/maltose transport system permease protein.
  
 
 0.530
SIR06260.1
Oligogalacturonide transport system permease protein.
  
 
 0.530
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.