STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ86607.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
SIQ86554.1
CxxC motif-containing protein, DUF1111 family.
 
  
 0.974
SIQ86664.1
Hypothetical protein.
 
  
 0.971
SIQ86495.1
Putative iron-regulated protein.
 
  
 0.966
SIR67112.1
Site-specific DNA recombinase.
  
     0.576
SIR72209.1
Purine-binding chemotaxis protein CheW.
  
     0.515
SIQ86431.1
Uncharacterized conserved protein, DUF1501 family.
       0.506
SIR61367.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
  
     0.477
SIQ86378.1
Uncharacterized conserved protein, DUF1800 family.
       0.435
SIR34754.1
Membrane-associated enzyme, PAP2 (acid phosphatase) superfamily.
  
     0.410
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.