STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR00824.1Cytochrome C oxidase, cbb3-type, subunit III. (162 aa)    
Predicted Functional Partners:
SIR00877.1
Hypothetical protein.
 
     0.945
SIR00762.1
Methylamine dehydrogenase light chain; Belongs to the aromatic amine dehydrogenase light chain family.
 
     0.937
SIR00607.1
Methylamine dehydrogenase heavy chain.
 
     0.935
SIR00700.1
Methylamine dehydrogenase accessory protein MauD.
 
 
   0.932
SIR00647.1
Methylamine utilisation protein MauE.
 
     0.912
SIR00928.1
GAF domain-containing protein.
       0.701
CcoO
Cytochrome c oxidase cbb3-type subunit 2.
 
 
 0.622
SIR00986.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
     
 0.508
CcoN
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.492
SIR00554.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.432
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.