STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ98164.1Tripartite-type tricarboxylate transporter, receptor component TctC. (341 aa)    
Predicted Functional Partners:
SIS00954.1
TctA family transporter.
 
  
 0.837
SIQ82743.1
Putative tricarboxylic transport membrane protein.
 
  
 0.814
SIS00940.1
Tripartite tricarboxylate transporter TctB family protein.
 
  
 0.733
SIQ98029.1
Protocatechuate 4,5-dioxygenase beta subunit.
       0.616
LigA
Protocatechuate 4,5-dioxygenase alpha subunit.
       0.610
SIQ98115.1
2-pyrone-4,6-dicarboxylate hydrolase.
       0.610
LigK
4-carboxy-4-hydroxy-2-oxoadipate aldolase.
       0.552
SIQ97991.1
4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase.
       0.515
SIQ82778.1
Putative tricarboxylic transport membrane protein.
 
  
 0.438
SIQ55407.1
Putative tricarboxylic transport membrane protein.
  
     0.433
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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