STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR02178.1Two-component system, NarL family, sensor histidine kinase UhpB. (462 aa)    
Predicted Functional Partners:
SIR02219.1
Two component transcriptional regulator, LuxR family.
 
 
 0.965
SIR02124.1
Two component transcriptional regulator, LuxR family.
 
 
 0.946
SIR95021.1
Two-component system, NarL family, sensor histidine kinase UhpB.
  
 
 
0.933
SIQ69012.1
Two component transcriptional regulator, LuxR family.
 
 
 0.854
SIR13173.1
Two component transcriptional regulator, LuxR family.
 
 
 0.854
SIR49751.1
Two component transcriptional regulator, LuxR family.
 
 
 0.854
SIR73278.1
Two component transcriptional regulator, LuxR family.
 
 
 0.854
SIR95040.1
Two component transcriptional regulator, LuxR family.
 
 
 0.854
SIQ70751.1
Two component transcriptional regulator, LuxR family.
 
 
 0.853
SIP98800.1
Two component transcriptional regulator, LuxR family.
 
 
 0.852
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.