STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR14550.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
SIR90054.1
iron(III) transport system substrate-binding protein.
   
    0.674
SIR48807.1
Iron complex transport system substrate-binding protein.
 
    0.622
SIR49375.1
Iron complex transport system substrate-binding protein.
 
    0.618
SIR14599.1
Small conductance mechanosensitive channel.
       0.556
SIR14498.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.520
SIR85559.1
Glutamate synthase (NADH) large subunit.
     
 0.518
SIR00449.1
Hemoglobin/transferrin/lactoferrin receptor protein.
  
  
 0.515
SIR00350.1
Iron complex transport system substrate-binding protein.
 
  
 0.503
SIR49264.1
Iron complex transport system ATP-binding protein.
  
  
 0.499
SIR00303.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.404
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.