STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR15004.1Outer membrane protein. (450 aa)    
Predicted Functional Partners:
SIR66106.1
Multidrug efflux pump.
  
 0.926
SIR66078.1
Multidrug efflux pump/outer membrane protein, multidrug efflux system.
     
 0.903
SIR14851.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.730
SIR14964.1
Rhodanese-related sulfurtransferase.
       0.702
SIR14893.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.680
SIR14927.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
       0.603
SIQ71795.1
Protein TonB.
  
  
 0.595
SIR56131.1
Membrane fusion protein, adhesin transport system.
 
 
 0.593
SIR89168.1
Membrane fusion protein, adhesin transport system.
 
 
 0.584
SIQ66241.1
Membrane fusion protein.
 
 
 0.571
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.