STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR26524.13-methylcrotonoyl-CoA carboxylase, alpha subunit. (666 aa)    
Predicted Functional Partners:
SIR26426.1
3-methylcrotonyl-CoA carboxylase beta subunit.
 0.999
SIQ40739.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 
 0.992
SIR26385.1
isovaleryl-CoA dehydrogenase.
 
 0.979
SIQ72096.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.955
SIQ74980.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.925
SIR26470.1
methylglutaconyl-CoA hydratase.
 0.925
SIR82567.1
acyl-CoA dehydrogenase.
  
 0.917
SIQ43321.1
Allophanate hydrolase.
 
  
 0.907
SIR02330.1
Allophanate hydrolase.
    
 0.905
SIR26577.1
hydroxymethylglutaryl-CoA lyase.
 
  
 0.887
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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