STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR48540.1Ammonium transporter. (400 aa)    
Predicted Functional Partners:
SIR71886.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 
 0.990
SIR93993.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 
 0.990
SIR36648.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.846
SIR85559.1
Glutamate synthase (NADH) large subunit.
 
  
 0.741
SIQ65008.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
  
 
 0.555
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.520
SIQ90168.1
Thiamine-phosphate diphosphorylase.
  
 
 0.474
SIQ25327.1
Two-component system, NtrC family, sensor histidine kinase PilS.
  
 
 0.472
SIR94914.1
Diguanylate cyclase (GGDEF) domain-containing protein.
      0.466
nifH
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.460
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.