STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EpsEPolysaccharide export outer membrane protein. (281 aa)    
Predicted Functional Partners:
SIR48398.1
Capsular exopolysaccharide family.
 
 
 0.987
SIP95533.1
Polysaccharide export outer membrane protein.
  
  
  0.974
EpsD
Peptidyl-prolyl cis-trans isomerase, EpsD family.
 
   
 0.933
SIR55341.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.933
EpsF
Chain length determinant protein EpsF.
 
 
 0.906
EpsF-2
Chain length determinant protein EpsF.
 
 
 0.906
SIP95485.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.901
SIR84355.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.861
SIP95572.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
 
 0.854
SIQ30722.1
Receptor protein-tyrosine kinase.
 
 
 0.833
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.