STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR61712.1Protein of unknown function. (177 aa)    
Predicted Functional Partners:
SIR61683.1
4Fe-4S binding domain-containing protein.
 
    0.828
SIR61654.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
 
    0.807
SIR61761.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.802
SIR61842.1
Formate dehydrogenase gamma subunit.
 
     0.797
fdhD-2
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 
 0.762
SIR61790.1
Formate dehydrogenase beta subunit.
 
     0.711
SIR71359.1
Hypothetical protein.
  
     0.674
SIR25199.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
  
     0.609
SIR18880.1
Putative molybdopterin biosynthesis protein.
 
  
 0.591
MobB
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB.
  
 
 0.577
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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