STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR80230.1Tripartite-type tricarboxylate transporter, receptor component TctC. (334 aa)    
Predicted Functional Partners:
SIS00954.1
TctA family transporter.
 
  
 0.842
SIQ82743.1
Putative tricarboxylic transport membrane protein.
 
  
 0.838
SIR80213.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.773
SIS00940.1
Tripartite tricarboxylate transporter TctB family protein.
 
  
 0.744
SIR80244.1
NADP-dependent aldehyde dehydrogenase.
       0.686
SIQ55407.1
Putative tricarboxylic transport membrane protein.
  
     0.571
SIR80266.1
Gluconolactonase.
       0.563
GudD
D-glucarate dehydratase.
       0.529
SIR80305.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    
0.529
SIQ82778.1
Putative tricarboxylic transport membrane protein.
 
  
 0.454
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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