STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MlaEphospholipid/cholesterol/gamma-HCH transport system permease protein. (262 aa)    
Predicted Functional Partners:
SIR85598.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
MlaD
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 0.999
SIR85685.1
Phospholipid transport system substrate-binding protein.
 
 
 0.968
SIQ23303.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.952
SIQ49456.1
Phospholipid transport system transporter-binding protein.
   
   0.898
SIR85661.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.859
SIR85703.1
Phospholipid transport system transporter-binding protein.
  
 
 0.600
LptG
Lipopolysaccharide export system permease protein.
  
  
 0.582
LptB
Lipopolysaccharide export system ATP-binding protein.
  
  0.579
bamA
Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
     0.545
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.