STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR85881.1Acyl-CoA-binding protein. (85 aa)    
Predicted Functional Partners:
SIR89938.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
   
 0.570
SIQ23602.1
Putative ATP-binding cassette transporter.
     
 0.549
SIQ52137.1
Putative ATP-binding cassette transporter.
     
 0.549
SIQ84565.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
 
   0.543
SIQ87585.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
     
 0.526
SIS05197.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
     
 0.526
SIR85899.1
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
       0.510
SIR25495.1
Amino acid adenylation domain-containing protein.
  
  
 0.492
CheY
Two-component system, chemotaxis family, response regulator CheY.
       0.491
SIQ49918.1
acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.490
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.