STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR89927.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (384 aa)    
Predicted Functional Partners:
SIQ00908.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.929
SIQ99282.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.929
SIR87613.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
  
 
0.920
SIQ31829.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
  
 
0.908
SIR79287.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
  
 
0.906
SIQ01004.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
  
 
0.905
SIR69350.1
Branched-chain amino acid transport system substrate-binding protein.
  
  
 
0.905
SIQ47473.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
     
  0.900
SIR84790.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
     
  0.900
SIQ00963.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.846
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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