STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR95273.1Hemerythrin-like domain-containing protein. (194 aa)    
Predicted Functional Partners:
SIR23034.1
Regulatory protein, luxR family.
  
 
 
 0.739
SIQ26759.1
Protein of unknown function.
  
     0.736
SIQ89378.1
Putative ABC transport system permease protein.
 
     0.731
SIR25531.1
Acyl transferase domain-containing protein.
   
 
 0.630
SIR25495.1
Amino acid adenylation domain-containing protein.
   
 
 0.627
SIQ89442.1
Predicted secreted hydrolase.
  
     0.505
SIQ87585.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
  
     0.495
SIR63203.1
Protein of unknown function.
  
     0.472
SIQ51118.1
Hypothetical protein.
 
     0.451
Tkt
Transketolase; Belongs to the transketolase family.
     
 0.450
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.