STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR96635.1Nitrogen fixation protein NifZ. (99 aa)    
Predicted Functional Partners:
SIR96649.1
Hypothetical protein.
       0.800
SIR96664.1
Cysteine desulfurase.
       0.779
SIR96678.1
Nitrogen fixation protein NifT.
       0.678
SIR96622.1
Nitrogen fixation protein NifZ.
     
 0.674
SIR96594.1
Hypothetical protein.
       0.671
SIR96606.1
Leucine rich repeat variant.
       0.671
SIR96579.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
       0.588
SIR96698.1
Hypothetical protein.
       0.586
SIR96714.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.572
SIR96733.1
SIR2-like domain-containing protein.
  
    0.561
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.