STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS02394.1L-rhamnose isomerase / sugar isomerase. (429 aa)    
Predicted Functional Partners:
SIS02404.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
     0.941
SIS02319.1
Sugar (pentulose or hexulose) kinase.
 
   
 0.919
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.919
SIS02383.1
Rhamnose-binding protein.
 
     0.899
SIS02344.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.766
SIS02358.1
Rhamnose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.763
SIS02370.1
Rhamnose ABC transporter ATP-binding protein.
 
     0.662
SIS02417.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.401
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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