STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS04729.1Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). (365 aa)    
Predicted Functional Partners:
SIS04743.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
  
 0.752
SIR25495.1
Amino acid adenylation domain-containing protein.
   
 
 0.678
SIR25403.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
   
 
 0.627
SIR80454.1
NitT/TauT family transport system permease protein.
 
  
 0.585
SIS04702.1
Cytochrome C oxidase, cbb3-type, subunit III.
       0.539
SIS04714.1
Alcohol dehydrogenase (cytochrome c).
       0.539
SIR25531.1
Acyl transferase domain-containing protein.
  
  
 0.537
SIR80433.1
NitT/TauT family transport system substrate-binding protein.
 
  
 0.516
SIR25455.1
Amino acid adenylation domain-containing protein.
   
 
 0.512
SIR80477.1
NitT/TauT family transport system ATP-binding protein.
 
  
 0.477
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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