STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS05157.1CRISPR associated protein Cas1. (242 aa)    
Predicted Functional Partners:
SIP99228.1
Hypothetical protein.
  
     0.533
SIP99379.1
Phosphonate transport system substrate-binding protein.
  
     0.516
SIS05167.1
Hypothetical protein.
       0.511
SIR96293.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.449
SIS05146.1
Hypothetical protein.
       0.439
SIS05135.1
Nucleotidyltransferase substrate binding protein, HI0074 family.
       0.439
SIQ52314.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.436
SIS09317.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.436
SIR69098.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.435
SIS10359.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.431
Your Current Organism:
Sphaerotilus natans
NCBI taxonomy Id: 34103
Other names: ATCC 13338, Cladothrix dichotoma, DSM 6575, LMG 7172, LMG:7172, S. natans, Sphaerotilus dichotomus, Sphaerotilus fluitans, Streptothrix fluitans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.