STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF93325.1Stage III sporulation protein AB. (172 aa)    
Predicted Functional Partners:
SFF93303.1
Stage III sporulation protein AA.
 
  
 0.998
SFF93345.1
Stage III sporulation protein AC.
 
  
 0.992
SFF93367.1
Stage III sporulation protein AD.
 
  
 0.989
SFF93387.1
Stage III sporulation protein AE.
 
  
 0.989
SFF93426.1
Stage III sporulation protein AG.
 
  
 0.984
SFF93405.1
Stage III sporulation protein AF.
 
  
 0.955
SFF94136.1
Stage II sporulation protein M.
  
  
 0.918
SFF93443.1
Stage III sporulation protein AH.
 
  
 0.895
SFH12573.1
Sporulation protein YqfC.
  
  
 0.865
SFF93850.1
Stage IV sporulation protein B.
 
   
 0.799
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.