STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF93929.1Glycosyl transferase family 2. (228 aa)    
Predicted Functional Partners:
SFF93947.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
 
 
 0.973
SFF93889.1
Uncharacterized membrane-anchored protein.
 
     0.962
SFF93909.1
Copper transport outer membrane protein, MctB.
 
     0.961
SFF94098.1
Protein of unknown function.
 
     0.850
SFF93967.1
Hypothetical protein.
       0.789
SFG00528.1
Hypothetical protein.
     0.783
SFF97039.1
Nucleotidyltransferase.
  
 0.659
SFG35093.1
Nucleotidyl transferase.
  
 0.659
SFH24894.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family.
  
 
 0.644
SFH09391.1
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
 
 0.637
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.