STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF93991.12-oxoglutarate ferredoxin oxidoreductase subunit delta. (75 aa)    
Predicted Functional Partners:
SFF94054.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
  
  0.980
SFF94012.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
  
  0.976
SFF94032.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
  
  0.973
SFF93967.1
Hypothetical protein.
 
     0.907
SFG38857.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
  
  0.898
SFG38888.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
  
  0.889
SFH14123.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
  
  0.861
SFF96531.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.853
SFG98799.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
  
  0.850
SFG77759.1
NADH-quinone oxidoreductase subunit G.
  
 
 0.848
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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