STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF95231.1Chemotaxis protein MotB. (271 aa)    
Predicted Functional Partners:
SFF95250.1
Chemotaxis protein MotA.
 
 0.999
SFG09062.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.988
SFF95781.1
Flagellar basal-body rod protein FlgC.
 
  
 0.984
SFF95839.1
Flagellar motor switch protein FliG.
 
 
 0.982
flgK
Flagellar hook-associated protein 1 FlgK.
 
  
 0.978
SFF95820.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.977
SFF95884.1
Type III secretion system ATPase, FliI/YscN.
 
  
 0.972
SFF96368.1
Flagellar motor switch protein FliN/FliY.
 
  
 0.970
SFF96347.1
Flagellar motor switch protein FliM.
 
  
 0.969
fliE
Flagellar hook-basal body complex protein FliE.
 
  
 0.968
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.