Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF96389.1 | SFF96418.1 | SAMN05660649_00232 | SAMN05660649_00233 | Uncharacterized conserved protein, DUF1015 family. | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | 0.918 |
SFF96389.1 | SFF96446.1 | SAMN05660649_00232 | SAMN05660649_00234 | Uncharacterized conserved protein, DUF1015 family. | Hypothetical protein. | 0.560 |
SFF96389.1 | SFG65752.1 | SAMN05660649_00232 | SAMN05660649_02324 | Uncharacterized conserved protein, DUF1015 family. | Uridine kinase. | 0.495 |
SFF96389.1 | SFG71750.1 | SAMN05660649_00232 | SAMN05660649_02485 | Uncharacterized conserved protein, DUF1015 family. | FMN phosphatase YigB, HAD superfamily. | 0.409 |
SFF96389.1 | SFG97465.1 | SAMN05660649_00232 | SAMN05660649_03340 | Uncharacterized conserved protein, DUF1015 family. | Aspartate aminotransferase. | 0.440 |
SFF96389.1 | SFH02971.1 | SAMN05660649_00232 | SAMN05660649_03565 | Uncharacterized conserved protein, DUF1015 family. | NADPH-dependent glutamate synthase beta chain. | 0.647 |
SFF96389.1 | ndk | SAMN05660649_00232 | SAMN05660649_03478 | Uncharacterized conserved protein, DUF1015 family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.477 |
SFF96418.1 | SFF96389.1 | SAMN05660649_00233 | SAMN05660649_00232 | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | Uncharacterized conserved protein, DUF1015 family. | 0.918 |
SFF96418.1 | SFF96446.1 | SAMN05660649_00233 | SAMN05660649_00234 | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | Hypothetical protein. | 0.583 |
SFF96418.1 | SFG71750.1 | SAMN05660649_00233 | SAMN05660649_02485 | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | FMN phosphatase YigB, HAD superfamily. | 0.515 |
SFF96418.1 | ndk | SAMN05660649_00233 | SAMN05660649_03478 | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.540 |
SFF96446.1 | SFF96389.1 | SAMN05660649_00234 | SAMN05660649_00232 | Hypothetical protein. | Uncharacterized conserved protein, DUF1015 family. | 0.560 |
SFF96446.1 | SFF96418.1 | SAMN05660649_00234 | SAMN05660649_00233 | Hypothetical protein. | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | 0.583 |
SFG65752.1 | SFF96389.1 | SAMN05660649_02324 | SAMN05660649_00232 | Uridine kinase. | Uncharacterized conserved protein, DUF1015 family. | 0.495 |
SFG65752.1 | SFG71750.1 | SAMN05660649_02324 | SAMN05660649_02485 | Uridine kinase. | FMN phosphatase YigB, HAD superfamily. | 0.836 |
SFG65752.1 | ndk | SAMN05660649_02324 | SAMN05660649_03478 | Uridine kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.916 |
SFG71750.1 | SFF96389.1 | SAMN05660649_02485 | SAMN05660649_00232 | FMN phosphatase YigB, HAD superfamily. | Uncharacterized conserved protein, DUF1015 family. | 0.409 |
SFG71750.1 | SFF96418.1 | SAMN05660649_02485 | SAMN05660649_00233 | FMN phosphatase YigB, HAD superfamily. | NTP pyrophosphatase, house-cleaning of non-canonical NTPs. | 0.515 |
SFG71750.1 | SFG65752.1 | SAMN05660649_02485 | SAMN05660649_02324 | FMN phosphatase YigB, HAD superfamily. | Uridine kinase. | 0.836 |
SFG97465.1 | SFF96389.1 | SAMN05660649_03340 | SAMN05660649_00232 | Aspartate aminotransferase. | Uncharacterized conserved protein, DUF1015 family. | 0.440 |
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