Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF97776.1 | SFG09062.1 | SAMN05660649_00303 | SAMN05660649_00637 | Enoyl-CoA hydratase/carnithine racemase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.931 |
SFF97776.1 | SFG75550.1 | SAMN05660649_00303 | SAMN05660649_02576 | Enoyl-CoA hydratase/carnithine racemase. | Signal transduction histidine kinase. | 0.834 |
SFF97776.1 | SFH03553.1 | SAMN05660649_00303 | SAMN05660649_03594 | Enoyl-CoA hydratase/carnithine racemase. | Predicted ATPase. | 0.929 |
SFF97776.1 | SFH07394.1 | SAMN05660649_00303 | SAMN05660649_03763 | Enoyl-CoA hydratase/carnithine racemase. | Predicted ATPase. | 0.958 |
SFF97776.1 | SFH09372.1 | SAMN05660649_00303 | SAMN05660649_03823 | Enoyl-CoA hydratase/carnithine racemase. | Malonyl CoA-acyl carrier protein transacylase. | 0.957 |
SFF97776.1 | SFH09391.1 | SAMN05660649_00303 | SAMN05660649_03824 | Enoyl-CoA hydratase/carnithine racemase. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.992 |
SFF97776.1 | SFH09411.1 | SAMN05660649_00303 | SAMN05660649_03825 | Enoyl-CoA hydratase/carnithine racemase. | Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.990 |
SFF97776.1 | SFH12161.1 | SAMN05660649_00303 | SAMN05660649_03941 | Enoyl-CoA hydratase/carnithine racemase. | Predicted ATPase. | 0.958 |
SFF97776.1 | SFH39067.1 | SAMN05660649_00303 | SAMN05660649_05028 | Enoyl-CoA hydratase/carnithine racemase. | PAS domain S-box-containing protein. | 0.848 |
SFF97776.1 | rpsO | SAMN05660649_00303 | SAMN05660649_01826 | Enoyl-CoA hydratase/carnithine racemase. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.783 |
SFG09062.1 | SFF97776.1 | SAMN05660649_00637 | SAMN05660649_00303 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Enoyl-CoA hydratase/carnithine racemase. | 0.931 |
SFG09062.1 | SFG75550.1 | SAMN05660649_00637 | SAMN05660649_02576 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Signal transduction histidine kinase. | 0.999 |
SFG09062.1 | SFH03553.1 | SAMN05660649_00637 | SAMN05660649_03594 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Predicted ATPase. | 0.999 |
SFG09062.1 | SFH07394.1 | SAMN05660649_00637 | SAMN05660649_03763 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Predicted ATPase. | 0.999 |
SFG09062.1 | SFH09372.1 | SAMN05660649_00637 | SAMN05660649_03823 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.978 |
SFG09062.1 | SFH09391.1 | SAMN05660649_00637 | SAMN05660649_03824 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.973 |
SFG09062.1 | SFH09411.1 | SAMN05660649_00637 | SAMN05660649_03825 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.980 |
SFG09062.1 | SFH12161.1 | SAMN05660649_00637 | SAMN05660649_03941 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Predicted ATPase. | 0.999 |
SFG09062.1 | SFH39067.1 | SAMN05660649_00637 | SAMN05660649_05028 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | PAS domain S-box-containing protein. | 0.999 |
SFG75550.1 | SFF97776.1 | SAMN05660649_02576 | SAMN05660649_00303 | Signal transduction histidine kinase. | Enoyl-CoA hydratase/carnithine racemase. | 0.834 |
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