STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF99015.1Rubrerythrin. (167 aa)    
Predicted Functional Partners:
SFF98908.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
    
 0.908
SFH18630.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 0.900
SFG69778.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 
 0.632
SFG77759.1
NADH-quinone oxidoreductase subunit G.
   
 0.623
SFF99035.1
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
       0.603
SFG36177.1
Rubredoxin.
 
  
 0.596
SFG72396.1
Flavorubredoxin.
 
  
 0.532
SFG58640.1
Rubredoxin.
 
  
 0.490
SFG69801.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
   
 0.488
SFF98991.1
Enoyl-CoA hydratase/carnithine racemase.
       0.470
Your Current Organism:
Desulfallas arcticus
NCBI taxonomy Id: 341036
Other names: D. arcticus, DSM 17038, Desulfallas arcticus (Vandieken et al. 2006) Watanabe et al. 2018, Desulfotomaculum arcticum, Desulfotomaculum arcticum Vandieken et al. 2006, JCM 12923, low G+C Gram-positive bacterium 15, strain 15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.